WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00098269 Genotype  CED-1::GFP
Phenotype Remark  RNAi of ifg-1 resulted in accumulation of germ cell corpses, as indicated by CED-1::GFP Remark  (Figure 8A, 8B) ifg-1 RNAi. Exact sequence used for RNAi not stated by authors; the first 400 bp of spliced coding region sequence from transcript M110.4a of gene used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002066 ifg-1 M110.4 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M110.4b M110.4b 3468   II: 8217254-8217302
CDS:M110.4d M110.4d 3480   II: 8217254-8217302
CDS:M110.4e M110.4e 3483   II: 8217254-8217302
CDS:M110.4a M110.4a 3471   II: 8217254-8217302
CDS:M110.4c M110.4c 3129   II: 8217839-8218837

1 Laboratories

Primary Identifier
KX

1 Phenotype

Identifier Name Description
WBPhenotype:0001180 accumulated germline cell corpses Animals exhibit an increase in the quantity of germ line cells that have undergone programmed cell death but have not been engulfed.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040175

0 Strain