WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00079310 Phenotype Remark  Phosphorylation of RNA Pol II CTD Ser 2 reduced in embryo
Remark  Probes only listed as yk163f12 and yk331g8 in paper, using yk163f12.3 and yk331g8.3 for curation; taf-10 and taf-11 in paper have since been renamed taf-9 and taf-10, respectively

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006391 taf-9 T12D8.7 Caenorhabditis elegans
WBGene00006392 taf-10 K03B4.3 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12D8.7 T12D8.7 552   III: 13624284-13624427
CDS:K03B4.3a K03B4.3a 531   V: 4687114-4687188
CDS:K03B4.3b K03B4.3b 540   V: 4687114-4687188

1 Laboratories

Primary Identifier
LD

1 Phenotype

Identifier Name Description
WBPhenotype:0001351 protein phosphorylation reduced Animals exhibit decreased levels of protein phosphorylation compared to that observed in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004890

0 Strain