WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00101714 Genotype  med-1p::GFP::POP-1 ("mgPOP-1")
Phenotype Remark  wrm-1 RNAi resulted in mgPOP-1 (GFP::POP-1) physically associating with extra-chromosomal arrays carrying end-1 and end-3 promoters in both MS and E blastomeres, as well as in their daughters Remark  (Figure 5G-5I) wrm-1 RNAi. Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006943 wrm-1 B0336.1 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0336.1a B0336.1a 2391   III: 5722883-5722907
CDS:B0336.1b B0336.1b 2229   III: 5723639-5723782

1 Laboratories

Primary Identifier
JR

1 Phenotype

Identifier Name Description
WBPhenotype:0001372 protein DNA interaction variant Variations in the selective and non-covalent physical association between a protein and a specific DNA sequence, compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005341

0 Strain