WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00091896 Phenotype Remark  RNAi resulted in reduced interaction between the DDL-1 and HSF-1 proteins, as determined by co-immunoprecipitation experiments
Remark  (Figure 5A,S4A) daf-2 RNAi
Paste the following link
Lists
This RNAi isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000898 daf-2 Y55D5A.5 Caenorhabditis elegans
WBGene00000912 daf-16 R13H8.1 Caenorhabditis elegans

15 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13H8.1i R13H8.1i 1548   I: 10750632-10750655
CDS:R13H8.1k R13H8.1k 1458   I: 10750960-10750984
CDS:R13H8.1d R13H8.1d 1464   I: 10750960-10750984
CDS:R13H8.1b R13H8.1b 1527   I: 10763103-10763347
CDS:R13H8.1c R13H8.1c 1533   I: 10763103-10763347
CDS:Y55D5A.5d Y55D5A.5d 5400   III: 2995919-2996014
CDS:R13H8.1a R13H8.1a 1593   I: 10771508-10772149
CDS:R13H8.1e R13H8.1e 912   I: 10772999-10773121
CDS:R13H8.1f R13H8.1f 1554   I: 10750632-10750655
CDS:R13H8.1h R13H8.1h 1626   I: 10750498-10750509
CDS:R13H8.1l R13H8.1l 1224   I: 10763654-10763706
CDS:R13H8.1m R13H8.1m 1218   I: 10763654-10763706
CDS:Y55D5A.5a Y55D5A.5a 5541   III: 2995919-2996014
CDS:Y55D5A.5c Y55D5A.5c 5787   III: 2995919-2996014
CDS:Y55D5A.5e Y55D5A.5e 5313   III: 2995919-2996014

1 Laboratories

Primary Identifier
EQ

1 Phenotype

Identifier Name Description
WBPhenotype:0001369 protein interaction variant Variations in the selective and non-covalent physical association between two or more proteins, or a protein and nucleic acid/macromolecular complex, compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040689

1 Strain

WormBase ID
WBStrain00042972