WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00101066 Genotype  rrf-3(pk1426); him-8(e1489)
Remark  (Table S2) Y53F4B.13 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013160 cmtr-1 Y53F4B.13 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53F4B.13a Y53F4B.13a 2757   II: 15026196-15026204
CDS:Y53F4B.13d Y53F4B.13d 1785   II: 15026196-15026204
CDS:Y53F4B.13b Y53F4B.13b 2694   II: 15026196-15026204
CDS:Y53F4B.13c Y53F4B.13c 1848   II: 15026196-15026204

1 Laboratories

Primary Identifier
DZ

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0002188 male somatic gonad development variant Any variation in the progression of the components of the male gonad that are separate from the germline proper over time, from its formation to its mature structure compared to control. In C. elegans, the male somatic gonad consists of three tissues: distal tip cells (DTCs), the seminal vesicle, and the vas deferens (Wormatlas).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00036019

0 Strain