WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00101301 Genotype  rrf-3(pk1426); him-8(e1489); POPTOP (POP-1 and TCF Optimal Promoter) consisting of (7x POP-1 binding sites)::(pes-10 minimal promoter)::mCherry [as a Wnt/Beta-catenin pathway activity reporter]
Phenotype Remark  zen-4 RNAi resulted in reduced numbers of POPTOP mCherry-positive cells in the male gonad, compared to control Remark  (Figure 5B) zen-4 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006974 zen-4 M03D4.1 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M03D4.1a M03D4.1a 2328   IV: 6118224-6118666
CDS:M03D4.1b M03D4.1b 2319   IV: 6118224-6118666
CDS:M03D4.1d M03D4.1d 2364   IV: 6118224-6118666
CDS:M03D4.1f M03D4.1f 2358   IV: 6118224-6118666
CDS:M03D4.1c M03D4.1c 2334   IV: 6118224-6118666
CDS:M03D4.1e M03D4.1e 2325   IV: 6118224-6118666

1 Laboratories

Primary Identifier
DZ

1 Phenotype

Identifier Name Description
WBPhenotype:0001279 transgene expression reduced male Any decrease in the intensity of expression of a gene product produced by exogenous DNA, exclusively in the male, that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00036019

0 Strain