WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00096195 Phenotype Remark  RNAi results in weak activation of the nlp-29::GFP reporter gene
Remark  (Table S2A) rpn-2 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation. If Ahringer clone not available, Vidal laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004459 rpn-2 C23G10.4 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23G10.4b C23G10.4b 2898   III: 6199186-6199240
CDS:C23G10.4a C23G10.4a 2616   III: 6199186-6199240

1 Laboratories

Primary Identifier
GR

1 Phenotype

Identifier Name Description
WBPhenotype:0002539 antimicrobial gene expression increased Animals exhibit an increase in the expression of one or more known, endogenous, antimicrobial genes, compared to controls.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040984

1 Strain

WormBase ID
WBStrain00021974