WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00096201 Phenotype Remark  RNAi results in weak activation of the nlp-29::GFP reporter gene
Remark  (Table S2A) rpt-5 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation. If Ahringer clone not available, Vidal laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004505 rpt-5 F56H1.4 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56H1.4 F56H1.4 1293   I: 5742051-5742243

1 Laboratories

Primary Identifier
GR

1 Phenotype

Identifier Name Description
WBPhenotype:0002539 antimicrobial gene expression increased Animals exhibit an increase in the expression of one or more known, endogenous, antimicrobial genes, compared to controls.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040984

1 Strain

WormBase ID
WBStrain00021974