WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00038580 Phenotype Remark  RNAi of vhp-1 resulted in slightly increased pathogen resistance in the WT background. Synchronized populations of L1 larvae E. coli HT115 carrying RNAi feeding vector and transferred to lawns of P. aeruginosa strain PA14 at the L4 larval stage. Worms were scored as dead when they no longer responded to touch.
Remark  RNAi of vhp-1 resulted in slightly increased pathogen resistance in the WT background.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006923 vhp-1 F08B1.1 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08B1.1e F08B1.1e 1986   II: 5323276-5323284
CDS:F08B1.1d F08B1.1d 1761   II: 5334558-5334649
CDS:F08B1.1f F08B1.1f 1509   II: 5338228-5338356
CDS:F08B1.1g F08B1.1g 1347   II: 5338773-5339014
CDS:F08B1.1a F08B1.1a 1974   II: 5331489-5331671
CDS:F08B1.1b F08B1.1b 1821   II: 5336307-5336562

1 Laboratories

Primary Identifier
AU

1 Phenotype

Identifier Name Description
WBPhenotype:0001014 pathogen resistance increased Animals are less prone to infection compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00024299

1 Strain

WormBase ID
WBStrain00000001