WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00089921 Genotype  ccIs55 [unc-54::lacZ]
Phenotype Remark  RNAi was observed to significantly reduce cytosolic protein levels in body wall muscles, as determined by reduced LacZ staining compared to controls. This affect was observed after chronic RNAi exposure (RNAi continuously for two generations), but not after acute exposure to RNAi only during adulthood. Remark  (Figure 2) egl-4 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001173 egl-4 F55A8.2 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55A8.2h F55A8.2h 2352   IV: 1848071-1848226
CDS:F55A8.2b F55A8.2b 2214   IV: 1849665-1849691
CDS:F55A8.2e F55A8.2e 2232   IV: 1854447-1854491
CDS:F55A8.2c F55A8.2c 2250   IV: 1858557-1858619
CDS:F55A8.2a F55A8.2a 2343   IV: 1848071-1848226
CDS:F55A8.2d F55A8.2d 588   IV: 1871011-1871270
CDS:F55A8.2f F55A8.2f 1413   IV: 1873438-1873455
CDS:F55A8.2g F55A8.2g 1455   IV: 1871828-1871887

1 Laboratories

Primary Identifier
CC

1 Phenotype

Identifier Name Description
WBPhenotype:0001645 protein degradation variant Variations in the chemical reactions and pathways resulting in the directed breakdown of a protein (via the destruction of its native, active configuration) compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040284

0 Strain