WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00091681 Genotype  ccIs55 [sup-7(st5); unc-54::LacZ] V
Phenotype Remark  RNAi resulted in increased protein degradation in muscle cytosol, as indicated by reduced levels of staining of Beta-Galactosidase expressed from an unc-54::LacZ reporter transgene Remark  (Figure 1A) uig-1 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009337 uig-1 F32F2.1 Caenorhabditis elegans
WBGene00235322 F32F2.4 F32F2.4 Caenorhabditis elegans

7 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F32F2.1e F32F2.1e 2328   V: 13273590-13273763
CDS:F32F2.1b F32F2.1b 2919   V: 13273590-13273763
CDS:F32F2.1d F32F2.1d 2859   V: 13273590-13273763
CDS:F32F2.4 F32F2.4 102   V: 13276259-13276360
CDS:F32F2.1a F32F2.1a 2760   V: 13273590-13273763
CDS:F32F2.1c F32F2.1c 2877   V: 13273590-13273763
CDS:F32F2.1h F32F2.1h 1251   V: 13273590-13273763

1 Laboratories

Primary Identifier
CC

1 Phenotype

Identifier Name Description
WBPhenotype:0001645 protein degradation variant Variations in the chemical reactions and pathways resulting in the directed breakdown of a protein (via the destruction of its native, active configuration) compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040652

0 Strain