WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00107651 Phenotype Remark  "To study the effect of ULP-4 activity on the HMGS-1 modification state, we knocked down ULP-4 SUMO protease by RNAi. Strikingly, this knockdown resulted in an increased level of HMGS-1 sumoylation in vivo (Fig 2G)."
Remark  (Figure 2G) ulp-4 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

3 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006739 ulp-4 C41C4.6 Caenorhabditis elegans
WBGene00219852 C41C4.16 C41C4.16 Caenorhabditis elegans
WBGene00219853 C41C4.17 C41C4.17 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C41C4.6 C41C4.6 1149   II: 8130009-8130156

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0002362 protein sumoylation variant Variations in the process by which one or more SUMO moieties are added to a protein, compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00045692

0 Strain