WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00084572 Genotype  agIs17 (irg-1::gfp)
Phenotype Remark  gei-17 RNAi suppresses the increase in irg-1::gfp expression induced by P.aeruginosa infection Remark  Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001574 gei-17 W10D5.3 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W10D5.3a W10D5.3a 2040   I: 9101175-9101233
CDS:W10D5.3c W10D5.3c 2343   I: 9101175-9101233
CDS:W10D5.3e W10D5.3e 1992   I: 9101175-9101233
CDS:W10D5.3d W10D5.3d 2034   I: 9101175-9101233
CDS:W10D5.3f W10D5.3f 2262   I: 9101530-9101672
CDS:W10D5.3g W10D5.3g 2058   I: 9101530-9101672

1 Laboratories

Primary Identifier
ERT

2 Phenotype

Identifier Name Description
WBPhenotype:0001278 transgene expression reduced Any decrease in the intensity of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.
WBPhenotype:0001857 pathogen induced gene expression variant Gene expression of an animal is not influenced by the exposure to disease causing agents in the same manner as control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00035891

0 Strain