WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00102045 Genotype  smf-3(-1500)::GFP-his
Phenotype Remark  bipyridyl (BP), a chelator of iron, induces expression of smf-3(-1500)::GFP-his in worms fed control (empty vector L4400) RNAi compared to worms grown on NGM without BP (Figure 4D). By contrast, the BP-induced expression of GFP is blocked by hif-1 RNAi. Remark  (Figure 4D) hif-1 RNAi
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001851 hif-1 F38A6.3 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38A6.3a F38A6.3a 2160   V: 20780502-20780521
CDS:F38A6.3b F38A6.3b 2166   V: 20780502-20780521
CDS:F38A6.3e F38A6.3e 2136   V: 20781319-20781505
CDS:F38A6.3c F38A6.3c 1512   V: 20782536-20782568
CDS:F38A6.3d F38A6.3d 1998   V: 20780502-20780521
CDS:F38A6.3f F38A6.3f 2142   V: 20781319-20781505

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0001838 drug induced gene expression variant Gene expression of an animal is not influenced by drug treatment in the same manner as control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040550

0 Strain