WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00080839 Genotype  SP12::GFP; histone H2B::CherryRed
Phenotype Remark  lpin-1(RNAi) led to a disruption of ER structure, with the appearance of membrane sheets, patches and ring or vesicle-like structures. Embryos with a mild nuclear phenotype typically exhibited a stringy ER morphology, with an abundance of ER sheets in place of the tubules network. Embryos with a severe nuclear phenotype exhibited sheet-like ER structures, as well as patches and vesicle-like structure that did not contain DNA.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010425 lpin-1 H37A05.1 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H37A05.1 H37A05.1 2385   V: 13650812-13650986

1 Laboratories

Primary Identifier
OCF

2 Phenotype

Identifier Name Description
WBPhenotype:0001026 nuclear morphology variation early emb Animals exhibit variations in the form, structure or composition of the membrane enclosed organelle which contains most of the cell's genetic material during the early embryonic stage compared to control animals (Wormatlas).
WBPhenotype:0001880 endoplasmic reticulum morphology variant Any variation in the form, structure or composition of the endoplasmic reticulum compared to control. The endoplasmic reticulum (ER) is an irregular network of membranes, that occurs in the cytoplasm, and forms a complex meshwork of tubular channels. The ER has two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00033438

0 Strain