WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F52B5.5a Sequence Name  F52B5.5a
Length (nt)  1935   Chromosome Location  I: 8324301-8324340
Chromosome . Primary Identifier  I Chromosome Location . Start  8324301
Chromosome Location . End  8324340
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52B5.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE29805 CEP-1, isoform a 74.6 644 Caenorhabditis elegans
 

Other

49 RNAi

WormBase ID
WBRNAi00069864
WBRNAi00098324
WBRNAi00098323
WBRNAi00098325
WBRNAi00113226
WBRNAi00097918
WBRNAi00047923
WBRNAi00047924
WBRNAi00069863
WBRNAi00062891
WBRNAi00098355
WBRNAi00003737
WBRNAi00003738
WBRNAi00065429
WBRNAi00065474
WBRNAi00098262
WBRNAi00098263
WBRNAi00097756
WBRNAi00097757
WBRNAi00065833
WBRNAi00032585
WBRNAi00097755
WBRNAi00112996
WBRNAi00097924
WBRNAi00065473
WBRNAi00069858
WBRNAi00107527
WBRNAi00098071
WBRNAi00098070
WBRNAi00061821

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F52B5.5a 8324301 8324340 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000467 cep-1 F52B5.5 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:F52B5.5a 8324301 8324340 1
CDS:F52B5.5a 8324392 8324471 1
CDS:F52B5.5a 8324524 8324597 1
CDS:F52B5.5a 8324649 8324811 1
CDS:F52B5.5a 8324937 8325029 1
CDS:F52B5.5a 8325074 8325234 1
CDS:F52B5.5a 8325460 8325697 1
CDS:F52B5.5a 8326199 8326364 1
CDS:F52B5.5a 8326809 8326950 1
CDS:F52B5.5a 8327463 8327676 1
CDS:F52B5.5a 8328031 8328267 1
CDS:F52B5.5a 8328333 8328454 1
CDS:F52B5.5a 8328503 8328707 1

1 Sequence

Length
1935

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F52B5.5a.1 F52B5.5a.1 2093   I: 8324295-8328859