WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00110102 Phenotype Remark  "Knockdown of eft-2, T25B9.9, sca-1 or T08A11.2 did not increase survival on P. aeruginosa (Extended Data Fig. 7c), however, sca-1(RNAi) and T08A11.2(RNAi) decreased lifespan on E. coli, indicating a reduction in general fitness (Extended Data Fig. 7d)."
Remark  (Extended Data Figure 7c) T25B9.9 RNAi
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012015 T25B9.9 T25B9.9 Caenorhabditis elegans
WBGene00012016 inpp-1 T25B9.10 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T25B9.9 T25B9.9 1455   IV: 10769661-10769990
CDS:T25B9.10a T25B9.10a 1257   IV: 10770313-10770424
CDS:T25B9.10b T25B9.10b 1299   IV: 10770313-10770424
CDS:T25B9.10c T25B9.10c 1290   IV: 10770313-10770424

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0001013 pathogen susceptibility increased Animals are more prone to infection compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00045829

0 Strain