WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00110087 Phenotype Remark  "Consistent with increased pathogen clearance via anti-microbial gene induction, UPRmt pre-activation prolonged the survival of animals challenged with P. aeruginosa, which required atfs-1 (Fig. 3e) and was independent of germline defects or feeding behaviour (Extended Data Fig. 5f, g)."
Remark  (Fig. 3e, 4) spg-7 RNAi
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

3 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004978 spg-7 Y47G6A.10 Caenorhabditis elegans
WBGene00220165 Y47G6A.36 Y47G6A.36 Caenorhabditis elegans
WBGene00021641 Y47G6A.15 Y47G6A.15 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47G6A.15 Y47G6A.15 837   I: 3473075-3473194
CDS:Y47G6A.10 Y47G6A.10 2349   I: 3467134-3467253

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0001014 pathogen resistance increased Animals are less prone to infection compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00045829

0 Strain