WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00089712 Genotype  glp-1(e2141)
Phenotype Remark  lipl-4, vps-34 double RNAi shortened life span, compared to glp-1(e2141) controls but not compared to either RNAi treatment on their own. Remark  (Figure S5F, Table S3) lipl-4, vps-34 double RNAi. Authors state RNAi clones obtained from the Ahringer and Vidal laboratories, Ahringer clone used for curation. If Ahringer clone not available, Vidal clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006932 vps-34 B0025.1 Caenorhabditis elegans
WBGene00019376 lipl-4 K04A8.5 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0025.1a B0025.1a 2706   I: 6028488-6028649
CDS:K04A8.5a K04A8.5a 1236   V: 6550199-6550306
CDS:K04A8.5b K04A8.5b 765   V: 6550920-6551036
CDS:B0025.1c B0025.1c 2694   I: 6028500-6028649

1 Laboratories

Primary Identifier
MAH

1 Phenotype

Identifier Name Description
WBPhenotype:0001171 shortened life span The duration of viability in the adult phase of the life-cycle is less than that of control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040180

0 Strain