WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00095104 Genotype  hsp-16.1::GFP
Phenotype Remark  Heat-shock responses, both to heat and microwaves, are suppressed after RNAi of hsf-1 as measured by the reduced induction of hsp-16.1::GFP. Remark  Authors used strain PC161 which incorporates a double reporter construct with green fluorescent protein (GFP) and lacZ genes fused in-frame into the second exon of the hsp-16.1 gene.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002004 hsf-1 Y53C10A.12 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53C10A.12 Y53C10A.12 2016   I: 11953797-11953889

0 Laboratories

2 Phenotype

Identifier Name Description
WBPhenotype:0001273 organism heat response variant Any variation in the state or activity of an organism (in terms of movement, gene expression, etc.) in response to heat (high temperatures above the optimal temperature for that organism), compared to control.
WBPhenotype:0001278 transgene expression reduced Any decrease in the intensity of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005901

0 Strain