WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00110853 Genotype  frIs7[Pnlp-29::GFP]
Phenotype Remark  RNAi resulted in a reduction in expression of the anitmicrobial peptide gene nlp-29 in worms after infection by Drechmeria coniospora, as indicated by reduced expression of a Pnlp-29::GFP transgene, compared to controls Remark  Table S5, sheet "final 297 clones", column "Is clone/overlaps clone"
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002203 kin-20 F46F2.2 Caenorhabditis elegans

7 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F46F2.2e F46F2.2e 894   X: 15270733-15270748
CDS:F46F2.2d F46F2.2d 1443   X: 15271105-15271123
CDS:F46F2.2a F46F2.2a 1440   X: 15270733-15270748
CDS:F46F2.2b F46F2.2b 948   X: 15269657-15269726
CDS:F46F2.2c F46F2.2c 1494   X: 15269657-15269726
CDS:F46F2.2f F46F2.2f 897   X: 15271105-15271123
CDS:F46F2.2g F46F2.2g 930   X: 15271105-15271123

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0002460 no induction of antimicrobial peptide expression after infection Animals exhibit no induction of expression of an antimicrobial peptide after an infection, unlike control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00049531

0 Strain