WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00114431 Phenotype Remark  Fig 3b & 3c; enhanced neurodegeneration in dopaminergic cells expressing alpha-synuclein
Remark  vps-39 (WBGene00011625) RNAi (Arhinger RNAi clone)
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011625 vps-39 T08G5.5 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08G5.5a T08G5.5a 2772   V: 14034593-14034805
CDS:T08G5.5c T08G5.5c 2763   V: 14034593-14034805
CDS:T08G5.5d T08G5.5d 2772   V: 14034593-14034805
CDS:T08G5.5b T08G5.5b 2781   V: 14034593-14034805

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0002380 neuron degeneration enhanced Neurons undergo a dramatic decrease in cell volume, collapse of the vacuoles and processes, and complete disintegration of the plasma membrane and most organelles at a faster rate or greater extent than those under conditions that elicit this response in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040756

1 Strain

WormBase ID
WBStrain00035201