WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00110996 Genotype  frIs7[Pnlp-29::GFP]
Phenotype Remark  RNAi resulted in an increase in expression of the anitmicrobial peptide gene nlp-29 in worms after infection by Drechmeria coniospora, as indicated by increased expression of a Pnlp-29::GFP transgene, compared to controls Remark  Table S3, sheet "ID Hipi clones", column "Is clone/overlaps clone"
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019435 K06A9.1 K06A9.1 Caenorhabditis elegans

7 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K06A9.1d K06A9.1d 4116   X: 1547509-1547620
CDS:K06A9.1c K06A9.1c 2478   X: 1549447-1551340
CDS:K06A9.1a K06A9.1a 3354   X: 1547509-1547620
CDS:K06A9.1b K06A9.1b 7791   X: 1547509-1547620
CDS:K06A9.1e K06A9.1e 4863   X: 1547509-1547620
CDS:K06A9.1f K06A9.1f 5409   X: 1547509-1547620
CDS:K06A9.1g K06A9.1g 5685   X: 1547509-1547620

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0002459 hyperinduction of antimicrobial peptide expression after infection Animals exhibit hyperinduction of expression of an antimicrobial peptide after an infection, compared to control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00049531

0 Strain