WormMine: RNAi WBRNAi00094608

• WormBase ID: WBRNAi00094608
• Genotype: sur-5::UbV-GFP (strain PP563)
• Phenotype Remark: There was no change in sur-5::UbV-GFP reporter expression in RNAi worms after treatment with IR. In wildtype worms the expression is reduced, therefore RNAi resulted in failure to degrade UbV-GFP (protein turnover). sur-5::UbV-GFP reporter expression was assessed 24 h post treatment with 90 Gy IR.
• Remark: The sur-5::UbV-GFP reporter strain expresses ubiquitin with an C-terminal glycine to valine mutation fused to GFP under the control of the sur-5 promoter. It is used to assess protein turnover.

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Data Sets

• WormBaseAcedbConverter

2 Inhibits Gene

WormBase Gene ID	Gene Name	Sequence Name	Organism
WBGene00004464	rpn-8	R12E2.3	Caenorhabditis elegans
WBGene00044929	R12E2.17	R12E2.17	Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:R12E2.3	R12E2.3	1089	I: 4175323-4175442

1 Laboratories

Primary Identifier
BJS

1 Phenotype

Identifier	Name	Description
WBPhenotype:0002010	protein turnover variant	The dynamics of the replacement of old proteins by newly synthesized or modified proteins varies from that of control animals. This phenotype is often measured by fluorescence recovery after photobleaching (FRAP).

0 Phenotype _ Not _ Observed

1 Reference

First Author	Title	Year	Journal	Volume	Pages	PubMed ID
						WBPaper00044098

0 Strain