WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00009435 Phenotype Remark  %lethal range
Secondary Identifier  JA:ZC101.2

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006787 unc-52 ZC101.2 Caenorhabditis elegans

13 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC101.2c ZC101.2c 6888   II: 14652558-14652809
CDS:ZC101.2f ZC101.2f 7170   II: 14652558-14652809
CDS:ZC101.2i ZC101.2i 6591   II: 14652558-14652809
CDS:ZC101.2m ZC101.2m 7152   II: 14652558-14652809
CDS:ZC101.2n ZC101.2n 7167   II: 14652558-14652809
CDS:ZC101.2o ZC101.2o 7440   II: 14652558-14652809
CDS:ZC101.2a ZC101.2a 7449   II: 14652558-14652809
CDS:ZC101.2d ZC101.2d 12228   II: 14647479-14647857
CDS:ZC101.2e ZC101.2e 10128   II: 14647479-14647857
CDS:ZC101.2j ZC101.2j 6870   II: 14652558-14652809
CDS:ZC101.2k ZC101.2k 6891   II: 14652558-14652809
CDS:ZC101.2l ZC101.2l 6582   II: 14652558-14652809
CDS:ZC101.2r ZC101.2r 9816   II: 14652558-14652809

1 Laboratories

Primary Identifier
JA

4 Phenotype

Identifier Name Description
WBPhenotype:0000643 locomotion variant Animals exhibit deviations in self-propelled movement on a solid medium compared to control animals.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000644 paralyzed Animals do not move and are not responsive to external mechanical stimulation.
WBPhenotype:0000060 adult lethal Premature lethality during the adult stage. When applied to large-scale RNAi screens in C. elegans, this phenotype is present in at least 10% of analyzed worms, or at least 30% in the case of rrf-3 perturbed background.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005654

0 Strain