WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00114211 Remark  (Table S2) arx-3 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000201 arx-3 Y79H2A.6 Caenorhabditis elegans
WBGene00305050 Y92H12BL.7 Y92H12BL.7 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y92H12BL.7 Y92H12BL.7 528   I: 1376942-1377359
CDS:Y79H2A.6a Y79H2A.6a 1107   III: 12052694-12052714
CDS:Y79H2A.6b Y79H2A.6b 1128   III: 12052694-12052714

0 Laboratories

0 Phenotype

7 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000848 developmental delay The developmental progression of an animal over time, from its formation to its mature structure is delayed compared to control.
WBPhenotype:0001028 nuclear appearance variant The morphological appearance of nuclei differs from control animals.
WBPhenotype:0000366 three fold arrest Cessation of development that normally occurs in C. elegans 520-620min after the first cleavage at 20C, the stage between the 2-fold and fully elongated embryo.
WBPhenotype:0000494 two fold arrest Cessation of development that normally occurs in C. elegans 460-520 min after the first cleavage at 20C, the stage between the 1.5-fold and 3-fold embryo.
WBPhenotype:0000037 egg morphology variant Any variation in the overall structure or appearance of fertilized oocytes that are laid compared to those laid by control animals.
WBPhenotype:0002570 embryonic arrest during gastrulation Cessation of development during the gastrulation stage of embryonic development. In C. elegans, gastrulation occurs 100-290 minutes after first cleavage at 20 degrees Centigrade when the embryo develops from 28 cells to 421 cells (during the proliferating embryo life stage).
WBPhenotype:0000368 one point five fold arrest emb Cessation of development that normally occurs in C. elegans 420-460 min after the first embryonic cleavage at 20C, the stage between the comma and 2-fold embryo.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00056424

1 Strain

WormBase ID
WBStrain00047121