WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00103827 Genotype  xnIs96 [hmr-1p::HMR-1::GFP]
Phenotype Remark  In embryos carrying WT HMR-1::GFP, fluorescence at the apical adherens junction (AJ) increased linearly with time (Figures 6A-6C). In contrast, HMR-1::GFP was retained along the basolateral membrane in embryos subjected to ulp-2 RNAi; thus, localization of HMR-1 to AJs was abolished. Remark  (Figure 6) ulp-2 RNAi against exons 1-4 and 15
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006737 ulp-2 Y38A8.3 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38A8.3b Y38A8.3b 2136   II: 4956006-4956392
CDS:Y38A8.3c Y38A8.3c 1005   II: 4956006-4956392
CDS:Y38A8.3a Y38A8.3a 2682   II: 4956006-4956392

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000436 protein subcellular localization variant Any variation in the placement of a protein within in a cell or cellular compartment compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00048594

1 Strain

WormBase ID
WBStrain00007535