WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00108327 Phenotype Remark  MEX-5 localization was aberrantly symmetric in the one-cell embryo; embryos arrested before the first cell division
Remark  (Table S2) cul-3 RNAi. Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000838 cul-3 Y108G3AL.1 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y108G3AL.1a Y108G3AL.1a 2334   V: 177644-177700
CDS:Y108G3AL.1b Y108G3AL.1b 2154   V: 178593-179386
CDS:Y108G3AL.1c Y108G3AL.1c 723   V: 181483-181861
CDS:Y108G3AL.1d Y108G3AL.1d 342   V: 183691-183900

0 Laboratories

2 Phenotype

Identifier Name Description
WBPhenotype:0000436 protein subcellular localization variant Any variation in the placement of a protein within in a cell or cellular compartment compared to control.
WBPhenotype:0000040 one cell arrest early emb Embryos fail to divide and arrest as one-cell embryos.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00032251

0 Strain