WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00078040 Phenotype Remark  (P granule component) not associated with nucleus (perinuclear association).
Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

3 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004918 snr-5 ZK652.1 Caenorhabditis elegans
WBGene00004919 snr-6 Y49E10.15 Caenorhabditis elegans
WBGene00004920 snr-7 Y71F9B.4 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71F9B.4 Y71F9B.4 234   I: 2727018-2727146
CDS:ZK652.1 ZK652.1 258   III: 7862072-7862168
CDS:Y49E10.15 Y49E10.15 273   III: 12429295-12429511

1 Laboratories

Primary Identifier
TE

3 Phenotype

Identifier Name Description
WBPhenotype:0000867 embryonic arrest Cessation of development during any stage occurring after fertilization and until hatching compared to control.
WBPhenotype:0000436 protein subcellular localization variant Any variation in the placement of a protein within in a cell or cellular compartment compared to control.
WBPhenotype:0001302 P granule localization defective The restricted localization of P granules to germ cells or germ cell precursors is altered compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005457

0 Strain