WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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RNAi :

WormBase ID  WBRNAi00097640 Phenotype Remark  gck-1 RNAi resulted in gonads with disrupted progression through meiotic prophase, as indicated by altered germline staining patterns with H14 (recognizing a phosphorylated residue in the C-terminal domain of RNA Polymerase II) and pH3 (recognizing histone H3 phosphorylated at serine 10) antibodies.
Remark  (Figure 3) gck-1 RNAi

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001526 gck-1 T19A5.2 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19A5.2f T19A5.2f 1959   V: 8947811-8947888
CDS:T19A5.2b T19A5.2b 2412   V: 8948708-8949235
CDS:T19A5.2c T19A5.2c 2409   V: 8948708-8949235
CDS:T19A5.2g T19A5.2g 1914   V: 8949658-8949690
CDS:T19A5.2a T19A5.2a 1962   V: 8947811-8947888
CDS:T19A5.2d T19A5.2d 1917   V: 8949658-8949690
CDS:T19A5.2e T19A5.2e 1902   V: 8951431-8951448
CDS:T19A5.2h T19A5.2h 1899   V: 8951431-8951448

1 Laboratories

Primary Identifier
JS

2 Phenotype

Identifier Name Description
WBPhenotype:0001824 meiotic progression prophase variant Animals exhibit variations in any process necessary for the progression through prophase during meiosis compared to control animals.
WBPhenotype:0000424 antibody staining variant Any variation in the characteristic expression of a gene product, as detected by antibody staining, compared to control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00035301

0 Strain