WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00101821 Genotype  ceh-16(bp323); egIs1[Pdat-1::GFP] (marker for PDE neurons)
Phenotype Remark  pop-1 RNAi partially suppressed the defect in postdeirid (PDE neuron) formation resulting from aberrant symmetric division of the V5.p precursor cell in ceh-16(bp323) mutants Remark  (Table 2) pop-1 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004077 pop-1 W10C8.2 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W10C8.2 W10C8.2 1317   I: 2823468-2823937

1 Laboratories

Primary Identifier
HZ

4 Phenotype

Identifier Name Description
WBPhenotype:0001585 asymmetric cell division variant Any variation in a cell's ability to divide asymmetrically to produce two daughter cells with different developmental potentials compared to control.
WBPhenotype:0000816 neuron development variant Variations in the progression of a neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell compared to control.
WBPhenotype:0000414 cell fate transformation The cell takes on a different identity from which it was initially committed.
WBPhenotype:0000827 V lineages variant The descendants of any of the V precursor cells (V1-V6) exhibit altered developmental programs compared to their counterparts in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00034732

0 Strain