WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00091557 Phenotype Remark  chaf-2 RNAi resulted in incompletely penetrant embryonic lethality
Remark  (Figure 5 and data not shown) chaf-2 RNAi. Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022141 chaf-2 Y71G12B.1 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71G12B.1b Y71G12B.1b 1464   I: 1823454-1823573
CDS:Y71G12B.1a Y71G12B.1a 1470   I: 1823454-1823579

1 Laboratories

Primary Identifier
MT

2 Phenotype

Identifier Name Description
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000414 cell fate transformation The cell takes on a different identity from which it was initially committed.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040574

0 Strain