WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00070598 Phenotype Remark  Inability to move on plates in a normal serpentine manner. Affected animals were either completely paralyzed or moved only the anterior region.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

3 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000253 bli-3 F56C11.1 Caenorhabditis elegans
WBGene00018771 duox-2 F53G12.3 Caenorhabditis elegans
WBGene00271776 F53G12.18 F53G12.18 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53G12.18 F53G12.18 222   I: 144828-144971
CDS:F56C11.1 F56C11.1 4494   I: 146623-146748
CDS:F53G12.3 F53G12.3 4512   I: 137845-137886

0 Laboratories

9 Phenotype

Identifier Name Description
WBPhenotype:0000643 locomotion variant Animals exhibit deviations in self-propelled movement on a solid medium compared to control animals.
WBPhenotype:0000583 dumpy Worms are shorter and stouter than control animals at the same developmental stage.
WBPhenotype:0000644 paralyzed Animals do not move and are not responsive to external mechanical stimulation.
WBPhenotype:0000545 egg retention Eggs are retained in the uterus at a later stage when compared with control animals.
WBPhenotype:0001515 struts variant Animals exhibit variations in the quantity or patterning of electron-dense columnar structures that join the basal and cortical cuticle layers, from that observed in control animals.
WBPhenotype:0000025 blistered Fluid-filled blisters appear on the cuticle.
WBPhenotype:0000948 cuticle morphology variant Any variation in the appearance or structure of the rigid external coating which is secreted by the hypodermis, seam and some interfacial epithelial cells compared to control (Wormatlas).
WBPhenotype:0001010 clear Animals appear unusually transparent when compared to control.
WBPhenotype:0001523 extracellular matrix variant Any variation in the makeup, density or area of the ECM compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004841

1 Strain

WormBase ID
WBStrain00000001