WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00007226 Phenotype Remark  After 3-4 days 50-70% of L1 arrested animals die with signs of necrosis. Approximately 20% of the offspring can survive longer, sometimes reaching adult stage. These animals invariably display various abnormalities such as dumpy, incomplete molting and incomplete and defective gonadal and vulval development
Remark  communicated by Thomas Burglin prior to publication. Entire sequence of clone used for RNAi not known as only the ends of the sequence were determined. The only target shown is the best match. Secondary Identifier  TB:rbd-1

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004315 rbd-1 T23F6.4 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23F6.4a T23F6.4a 2619   IV: 12724990-12725211
CDS:T23F6.4b T23F6.4b 1167   IV: 12728077-12728609

1 Laboratories

Primary Identifier
TB

5 Phenotype

Identifier Name Description
WBPhenotype:0000691 gonad development variant Variations in the progression of the organ that produces gametes over time, from its formation to the mature structure compared to control.
WBPhenotype:0000583 dumpy Worms are shorter and stouter than control animals at the same developmental stage.
WBPhenotype:0000059 larval arrest The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage.
WBPhenotype:0000638 molt defect Animals exhibit defects in the process of periodic shedding, of part or all of its cuticle, during cuticle replacement that punctuates each larval stage.
WBPhenotype:0001262 vulval development incomplete The developmental progression of the egg-laying organ of female and hermaphrodite nematodes is halted prior to the formation of the mature structure.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005532

0 Strain