WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00089802 Remark  (Table S1) unc-11 RNAi. Authors report that these experiments were performed in strains PD55 (ccIs55 V), PJ727 (jIs01; ccIs55 V), and/or CB5600 (ccIs4251 I; him-8(e1489) IV).
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006751 unc-11 C32E8.10 Caenorhabditis elegans

7 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C32E8.10b C32E8.10b 1641   I: 3799205-3799353
CDS:C32E8.10c C32E8.10c 1923   I: 3799205-3799353
CDS:C32E8.10d C32E8.10d 1929   I: 3799205-3799353
CDS:C32E8.10e C32E8.10e 1767   I: 3799205-3799353
CDS:C32E8.10a C32E8.10a 1761   I: 3799205-3799353
CDS:C32E8.10f C32E8.10f 597   I: 3799205-3799353
CDS:C32E8.10h C32E8.10h 1647   I: 3799205-3799353

1 Laboratories

Primary Identifier
CC

2 Phenotype

Identifier Name Description
WBPhenotype:0000643 locomotion variant Animals exhibit deviations in self-propelled movement on a solid medium compared to control animals.
WBPhenotype:0000006 egg laying defective Eggs are not laid, laid at a slower rate or eggs are laid at a later stage of development compared to control.

7 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000688 sterile Animals generate defective gametes, are otherwise unable to reproduce or they generate progeny that are unable to reproduce.
WBPhenotype:0000697 protruding vulva Animals undergo incomplete vulval morphogenesis, resulting in the formation of a single protrusion at the site of the vulva.
WBPhenotype:0000583 dumpy Worms are shorter and stouter than control animals at the same developmental stage.
WBPhenotype:0000676 growth rate variant The increase in size or mass of an organism over time during the lifespan of the organism or over any developmental stage(s) is not similar to that observed for control animals.
WBPhenotype:0000038 exploded through vulva The animal is ruptured at the vulva and displays an extrusion of internal organs at the site of rupture.
WBPhenotype:0000645 roller The body of the animal rotates around its long axis as the animal moves, causing the animal to move in a circular pattern. In liquid media, wave propogation is helical rather than planar.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040284

0 Strain