WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00086271 Phenotype Remark  RNAi of lin-42 (exons 6-9) led to adults with egg laying defects, with progeny hatched internally, and everted vulvas

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018572 lin-42 F47F6.1 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47F6.1e F47F6.1e 1011   II: 1234175-1234429
CDS:F47F6.1d F47F6.1d 1965   II: 1234175-1234429
CDS:F47F6.1a F47F6.1a 894   II: 1234175-1234429
CDS:F47F6.1b F47F6.1b 1794   II: 1234175-1234429
CDS:F47F6.1g F47F6.1g 297   II: 1234175-1234429

1 Laboratories

Primary Identifier
RG

2 Phenotype

Identifier Name Description
WBPhenotype:0000545 egg retention Eggs are retained in the uterus at a later stage when compared with control animals.
WBPhenotype:0000696 everted vulva The eversion process, in which the vulval invagination is turned inside out during the final molt, is disrupted. In C.elegans, such variations in vulval eversion are primarily due to developmental defects in the somatic gonad (and sometimes vulva).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00028283

0 Strain