WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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RNAi :

WormBase ID  WBRNAi00028216 Phenotype Remark  penetrance is less than 90%
Remark  bacterial-feeding RNAi began at the L1 larval stage Secondary Identifier  MV_SV:mv_BAA07542

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002978 lev-11 Y105E8B.1 Caenorhabditis elegans

19 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105E8B.1k Y105E8B.1k 771   I: 14621514-14621596
CDS:Y105E8B.1o Y105E8B.1o 855   I: 14621514-14621596
CDS:Y105E8B.1p Y105E8B.1p 855   I: 14621514-14621596
CDS:Y105E8B.1s Y105E8B.1s 855   I: 14621514-14621596
CDS:Y105E8B.1c Y105E8B.1c 771   I: 14622429-14622511
CDS:Y105E8B.1t Y105E8B.1t 771   I: 14622429-14622511
CDS:Y105E8B.1j Y105E8B.1j 468   I: 14622429-14622511
CDS:Y105E8B.1e Y105E8B.1e 771   I: 14622661-14622743
CDS:Y105E8B.1a Y105E8B.1a 855   I: 14621514-14621596
CDS:Y105E8B.1b Y105E8B.1b 582   I: 14622429-14622511
CDS:Y105E8B.1d Y105E8B.1d 855   I: 14622429-14622511
CDS:Y105E8B.1f Y105E8B.1f 456   I: 14623660-14623709
CDS:Y105E8B.1g Y105E8B.1g 855   I: 14622429-14622511
CDS:Y105E8B.1i Y105E8B.1i 582   I: 14622429-14622511
CDS:Y105E8B.1l Y105E8B.1l 771   I: 14621514-14621596
CDS:Y105E8B.1m Y105E8B.1m 582   I: 14621514-14621596
CDS:Y105E8B.1n Y105E8B.1n 468   I: 14621514-14621596
CDS:Y105E8B.1q Y105E8B.1q 855   I: 14621514-14621596
CDS:Y105E8B.1r Y105E8B.1r 855   I: 14621514-14621596

2 Laboratories

Primary Identifier
MV
SV

5 Phenotype

Identifier Name Description
WBPhenotype:0000054 larval lethal The animal dies at any time between hatching and onset to adulthood.
WBPhenotype:0000032 sick Animals exhibit some combination of abnormal features relating to size, movement, body integrity, pigmentation, viability, fertility etc.
WBPhenotype:0000022 long Animals are longer than control animals at the same developmental stage.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00024497

0 Strain