WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00000253 Remark  yk150e3
Secondary Identifier  SA:yk150e3

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021012 pig-1 W03G1.6 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03G1.6b W03G1.6b 2100   IV: 513758-514176
CDS:W03G1.6f W03G1.6f 1368   IV: 513758-514176
CDS:W03G1.6d W03G1.6d 2109   IV: 513758-514185
CDS:W03G1.6a W03G1.6a 2112   IV: 507058-507147
CDS:W03G1.6c W03G1.6c 2121   IV: 507058-507147
CDS:W03G1.6e W03G1.6e 1380   IV: 507058-507147
CDS:W03G1.6g W03G1.6g 1389   IV: 507058-507147
CDS:W03G1.6h W03G1.6h 1377   IV: 513758-514185

2 Laboratories

Primary Identifier
SA
YK

0 Phenotype

5 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004651

0 Strain