WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00000302 Remark  yk160b6
Secondary Identifier  SA:yk160b6

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

4 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000548 clr-1 F56D1.4 Caenorhabditis elegans
WBGene00018960 ilcr-2 F56D1.2 Caenorhabditis elegans
WBGene00018961 mrps-16 F56D1.3 Caenorhabditis elegans
WBGene00219980 F56D1.17 F56D1.17 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56D1.4e F56D1.4e 4296   II: 5466474-5466547
CDS:F56D1.3 F56D1.3 444   II: 5474408-5474554
CDS:F56D1.4a F56D1.4a 4230   II: 5466474-5466547
CDS:F56D1.4b F56D1.4b 4335   II: 5466474-5466547
CDS:F56D1.4d F56D1.4d 4224   II: 5466474-5466547

2 Laboratories

Primary Identifier
SA
YK

0 Phenotype

5 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004651

0 Strain