WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00001136 Remark  yk285c7
Secondary Identifier  SA:yk285c7

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011904 hlb-1 T21H8.1 Caenorhabditis elegans

16 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21H8.1d T21H8.1d 2748   X: 13865539-13865577
CDS:T21H8.1j T21H8.1j 2937   X: 13865539-13865577
CDS:T21H8.1e T21H8.1e 1926   X: 13865539-13865577
CDS:T21H8.1r T21H8.1r 2316   X: 13865539-13865577
CDS:T21H8.1c T21H8.1c 2622   X: 13865539-13865577
CDS:T21H8.1m T21H8.1m 2352   X: 13865539-13865577
CDS:T21H8.1k T21H8.1k 2613   X: 13865539-13865577
CDS:T21H8.1a T21H8.1a 2763   X: 13865539-13865577
CDS:T21H8.1b T21H8.1b 2889   X: 13865539-13865577
CDS:T21H8.1f T21H8.1f 2052   X: 13865539-13865577
CDS:T21H8.1g T21H8.1g 2889   X: 13865539-13865577
CDS:T21H8.1h T21H8.1h 3015   X: 13865539-13865577
CDS:T21H8.1i T21H8.1i 2811   X: 13865539-13865577
CDS:T21H8.1l T21H8.1l 2739   X: 13865539-13865577
CDS:T21H8.1n T21H8.1n 2478   X: 13865539-13865577
CDS:T21H8.1s T21H8.1s 2442   X: 13865539-13865577

2 Laboratories

Primary Identifier
SA
YK

0 Phenotype

5 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004651

0 Strain