WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00001459 Remark  yk313a5
Secondary Identifier  SA:yk313a5

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001439 fkh-7 F26D12.1 Caenorhabditis elegans

14 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F26D12.1g F26D12.1g 2280   IV: 5584684-5585184
CDS:F26D12.1a F26D12.1a 2337   IV: 5584684-5585184
CDS:F26D12.1m F26D12.1m 1680   IV: 5601707-5601859
CDS:F26D12.1h F26D12.1h 1722   IV: 5601707-5601859
CDS:F26D12.1p F26D12.1p 258   IV: 5608363-5608444
CDS:F26D12.1f F26D12.1f 300   IV: 5608363-5608444
CDS:F26D12.1b F26D12.1b 1779   IV: 5601707-5601859
CDS:F26D12.1e F26D12.1e 888   IV: 5606230-5606441
CDS:F26D12.1i F26D12.1i 831   IV: 5606230-5606441
CDS:F26D12.1j F26D12.1j 2295   IV: 5584684-5585184
CDS:F26D12.1k F26D12.1k 2238   IV: 5584684-5585184
CDS:F26D12.1l F26D12.1l 1737   IV: 5601707-5601859
CDS:F26D12.1n F26D12.1n 846   IV: 5606230-5606441
CDS:F26D12.1o F26D12.1o 789   IV: 5606230-5606441

2 Laboratories

Primary Identifier
SA
YK

0 Phenotype

5 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004651

0 Strain