WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00039659 Remark 
Secondary Identifier 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

8 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003425 msp-10 K07F5.2 Caenorhabditis elegans
WBGene00003464 msp-77 F32B6.6 Caenorhabditis elegans
WBGene00003465 msp-78 T13F2.11 Caenorhabditis elegans
WBGene00003463 msp-76 ZK1251.6 Caenorhabditis elegans
WBGene00003466 msp-79 T13F2.10 Caenorhabditis elegans
WBGene00003467 msp-81 K07F5.1 Caenorhabditis elegans
WBGene00003449 msp-56 K07F5.3 Caenorhabditis elegans
WBGene00003432 msp-36 C04G2.4 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1251.6 ZK1251.6 384   IV: 9689015-9689398
CDS:T13F2.10 T13F2.10 384   IV: 9766771-9767154
CDS:T13F2.11 T13F2.11 384   IV: 9770046-9770429
CDS:K07F5.1 K07F5.1 384   IV: 9836034-9836417
CDS:C04G2.4 C04G2.4 384   IV: 10095433-10095816
CDS:F32B6.6 F32B6.6 384   IV: 9894631-9895014
CDS:K07F5.2 K07F5.2 384   IV: 9837649-9838032
CDS:K07F5.3 K07F5.3 384   IV: 9841540-9841923

1 Laboratories

Primary Identifier
TH

0 Phenotype

4 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00025054

0 Strain