WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00055183 Remark 
Secondary Identifier 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

4 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000028 abu-5 Y105C5A.4 Caenorhabditis elegans
WBGene00004158 pqn-76 Y105C5A.3 Caenorhabditis elegans
WBGene00004159 pqn-78 Y105C5A.5 Caenorhabditis elegans
WBGene00004160 pqn-79 Y105C5A.6 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105C5A.4 Y105C5A.4 1008   IV: 15590697-15590750
CDS:Y105C5A.3 Y105C5A.3 1008   IV: 15579086-15579139
CDS:Y105C5A.5 Y105C5A.5 1008   IV: 15593960-15594913
CDS:Y105C5A.6 Y105C5A.6 1008   IV: 15595570-15595623

1 Laboratories

Primary Identifier
TH

0 Phenotype

4 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00025054

0 Strain