WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00065900 Genotype  ptph-1::gpb-1(HairpinRNAi)
Remark  used cell specific promoters to knock-down gene function in specific cells

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001679 gpb-1 F13D12.7 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13D12.7b F13D12.7b 462   II: 11743979-11744085
CDS:F13D12.7a F13D12.7a 1023   II: 11743979-11744085

1 Laboratories

Primary Identifier
NA

1 Phenotype

Identifier Name Description
WBPhenotype:0000640 egg laying variant Animals exhibit variations in the stage of eggs laid, egg laying cycle, number of eggs or egg laying in response to stimuli compared to control.

2 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000663 osmotic avoidance variant Animals exhibit variations in the avoidance response to solutions of a particular osmotic strength compared to control. In C. elegans, animals typically avoid solutions of high osmotic strength.
WBPhenotype:0001454 quinine chemotaxis variant Any variation in the directed movement of a worm in response to a specific concentration gradient of the bitter tastant quinine, a water soluble molecule. In C. elegans, quinine is typically a repellant.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00029323

0 Strain