WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00075645 Phenotype Remark  Fifty-three percent had aberrant DTC turns, 26 percent showed ventralized DTC migration and 21 percent had overextension of the DTCs past the vulva. These defects were assayed in animals that had normal body size, shape, and movement.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003929 pat-2 F54F2.1 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54F2.1 F54F2.1 3681   III: 8818902-8819074

1 Laboratories

Primary Identifier
JE

5 Phenotype

Identifier Name Description
WBPhenotype:0000643 locomotion variant Animals exhibit deviations in self-propelled movement on a solid medium compared to control animals.
WBPhenotype:0000072 body morphology variant Animals exhibit variations in the form, structure or composition of any portion of their anatomy between the head and the tail compared to control animals.
WBPhenotype:0000053 paralyzed arrested elongation two fold Movement and elongation ceases at the two-fold stage. The myofilament lattice in body wall muscle cells is variant. However, development in embryos continues. Embryos hatch as inviable larvae.
WBPhenotype:0000231 body size variant Animals exhibit variations in the physical dimensions of its body compared to control animals of the same developmental stage.
WBPhenotype:0000195 distal tip cell migration variant Variations in the migration pattern of distal tip cells compared to control animals. In C. elegans, DTCs located on the anterior and posterior ends of the gonad primordium typically migrate in a symmetrical U-shaped pattern.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00030828

1 Strain

WormBase ID
WBStrain00000001