WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00106381 Remark  (Table 1) hsp-16.11 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation. If Ahringer clone not available, Vidal laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

10 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002015 hsp-16.1 T27E4.8 Caenorhabditis elegans
WBGene00002017 hsp-16.11 T27E4.2 Caenorhabditis elegans
WBGene00006344 sup-39 C15F1.9 Caenorhabditis elegans
WBGene00194993 T27E4.11 T27E4.11 Caenorhabditis elegans
WBGene00044923 T27E4.10 T27E4.10 Caenorhabditis elegans
WBGene00220104 T27E4.22 T27E4.22 Caenorhabditis elegans
WBGene00194994 T27E4.12 T27E4.12 Caenorhabditis elegans
WBGene00014370 F40G12.13 F40G12.13 Caenorhabditis elegans
WBGene00014371 F40G12.14 F40G12.14 Caenorhabditis elegans
WBGene00014317 F08H9.11 F08H9.11 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27E4.8 T27E4.8 438   V: 9087293-9087604
CDS:T27E4.2 T27E4.2 438   V: 9090115-9090240

0 Laboratories

0 Phenotype

3 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000688 sterile Animals generate defective gametes, are otherwise unable to reproduce or they generate progeny that are unable to reproduce.
WBPhenotype:0000643 locomotion variant Animals exhibit deviations in self-propelled movement on a solid medium compared to control animals.
WBPhenotype:0000059 larval arrest The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00046852

1 Strain

WormBase ID
WBStrain00000001