WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00080550 Remark  The target gene for this experiment was reported as Y59A8B.9 (ebp-3) in Table S1 of the paper, but is actually Y59A8B.7 (ebp-1)

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007062 ebp-3 Y59A8B.9 Caenorhabditis elegans
WBGene00013344 ebp-1 Y59A8B.7 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y59A8B.7 Y59A8B.7 951   V: 18043592-18043738
CDS:Y59A8B.9 Y59A8B.9 564   V: 18055969-18056069

1 Laboratories

Primary Identifier
MAD

0 Phenotype

3 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000154 reduced brood size The characteristic number of offspring produced is lower compared to that of control animals.
WBPhenotype:0000643 locomotion variant Animals exhibit deviations in self-propelled movement on a solid medium compared to control animals.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00024200

1 Strain

WormBase ID
WBStrain00035144