WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00063781 Genotype  him-5(e1490); TS-IR-RNAi(asg-2)
Remark  TS-IR-RNAi(asg-2) is tissue-specific RNAi mediated by an inverted repeat (IR) of asg-2. Transgenic lines were generated of IRs whose transcription is under the control of the pkd-2 promoter and males were scored for mating behaviors.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000210 asg-2 C53B7.4 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C53B7.4 C53B7.4 396   X: 6841259-6841363

1 Laboratories

Primary Identifier
PT

1 Phenotype

Identifier Name Description
WBPhenotype:0004004 male response to contact defective The inability of a male to respond properly to a potential mate after contact. In C.elegans, proper response includes apposing the ventral side of his tail to the hermaphrodite's body and swimming backward.

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000649 vulva location variant Any variation in the male's ability to locate his partner's vulva when backing along the ventral side of the partner during mating compared to control. In C. elegans the male stops at the vulva, coordinates his movements to the hermaphrodite's, and positions his tail precisely over the vulva so that he may insert his spicules and ejaculate.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00024944

0 Strain