WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00086853 Genotype  mig-2(gm38mu133)
Phenotype Remark  Axon guidance defects (the axons failed to reach the VNC and often wandered along the lateral body wall), premature axon termination and defasciculation in the ventral nerve cord, ectopic axon formation (ectopic axons formed as branches from the main axon or emanated from the cell body). Remark  paper remark: Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004287 rac-2 K03D3.10 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K03D3.10 K03D3.10 588   IV: 16308225-16308329

1 Laboratories

Primary Identifier
LE

4 Phenotype

Identifier Name Description
WBPhenotype:0000880 axon development variant Any variation in the processes that influence the generation of neuronal extensions, that carry efferent (outgoing) action potentials from the cell body towards target cells compared to control.
WBPhenotype:0000384 axon guidance variant Variations in the cue-directed extension of an axon towards a specific target site compared to control. (Axon guidance often depends on a combination of attractive and repulsive cues).
WBPhenotype:0002490 ectopic axon outgrowth Neurons exhibit axon outgrowth in locations not normally found in controls.
WBPhenotype:0000632 axon fasciculation variant The ability of axons to converge and form a bundle of nerve fibres (fascicle) is compromised.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005607

0 Strain