WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00066136 Genotype  unc-129::GFP; him-5(e1490)
Phenotype Remark  posterior is shrunken Remark  Entire sequence of clone used for RNAi not known as only the ends of the sequence were determined. The only target shown is the best match.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022277 homt-1 Y74C9A.3 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y74C9A.3 Y74C9A.3 705   I: 4221-4358

1 Laboratories

Primary Identifier
CH

9 Phenotype

Identifier Name Description
WBPhenotype:0000688 sterile Animals generate defective gametes, are otherwise unable to reproduce or they generate progeny that are unable to reproduce.
WBPhenotype:0000081 L1 arrest The developmental program of the animals does not continue past the first larval stage (L1).
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000070 male tail morphology variant Animals exhibit variations in the structure or organization of the somatic reproductive components of the posterior segment of the male from that observed in control males. In C. elegans, this region of the male includes the terminal canals of the reproductive tract, the digestive tract, and spicule channels along with the male specific sensilla (ray, post-cloacal, hook and spicule) and extends to the tip of the acellular fan.
WBPhenotype:0000634 pharyngeal pumping variant Any variation in the contraction and relaxation movements of the pharyngeal muscle that mediate feeding in nematodes compared to control.
WBPhenotype:0000054 larval lethal The animal dies at any time between hatching and onset to adulthood.
WBPhenotype:0000690 gonad migration variant Variations in the gross movement of the whole structure of the gonad along the body wall, behind the gonadal leader cell and away from the developing vulva compared to control (Wormatlas).
WBPhenotype:0000709 pharyngeal morphology variant Variations in the form or composition of the mouthparts at the anterior end of the digestive tract which contain a series of radial muscles, related neurons and epithelial cells, and several gland cells which may aid in digestion compared to control (Wormatlas).
WBPhenotype:0000368 one point five fold arrest emb Cessation of development that normally occurs in C. elegans 420-460 min after the first embryonic cleavage at 20C, the stage between the comma and 2-fold embryo.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004615

0 Strain